OUR
LAB

The Schaffer research group applies molecular and cellular engineering approaches to investigate biomedical problems focused on engineering of stem cell and gene therapeutics. Our group is a part of the department of Chemical and Biological Engineering, the Helen Wills Neuroscience Institute, and the Bioengineering Graduate Group at UC Berkeley.

Principal Investigator

David V. Schaffer

David Schaffer is a Chemical and Biomolecular Engineering, Bioengineering, and Molecular and Cell Biology at the University of California, Berkeley, and he also serves as the Director QB3, and the Bakar Labs, and the Bakar Fellows Program. He received his B.S. from Stanford University and Ph.D. from MIT, then conducted a postdoctoral fellowship at the Salk Institute for Biological Studies before joining Berkeley in 1999. There, he applies engineering principles to optimize gene and stem cell therapies, work that includes developing the concept of applying directed evolution to engineer targeted and efficient viral gene therapy vectors as well as new technologies to investigate and control stem cell fate decisions. In addition, he has co-founded seven companies from his lab, including 4D Molecular Therapeutics (NASDAQ FDMT), Ignite Immunotherapies (acquired by Pfizer) and Rewrite (acquired by Intellia). Finally, he has received recognitions including the National Academy of Engineering, National Academy of Inventors, Daniel I.C. Wong Award for Excellence in Biochemical Engineering, Andreas Acrivos Professional Progress Award, the American Institute of Chemical Engineers Pharmaceutical and Bioengineering Award, and the American Chemical Society Marvin Johnson Award.

Research

Gene Therapy

One of our major research thrusts is dedicated to understanding the biology and exploring the therapeutic potential of gene delivery, which serves as an effective means to control stem cells. Gene therapy can be defined as the introduction of genetic material to the cells of an individual for therapeutic benefit…

Stem Cells

Many of our efforts are dedicated to understanding the biology and exploring the therapeutic potential of stem cells. Stem cells are immature cells that exist in various locations of our bodies. Throughout our lifetimes, these cells divide and develop into the specialized cells that perform the functions necessary for organismal development and adult tissue function…

Publications

Agrawal, R., Oraskovich, S. v., Francis, P., & Schaffer, D. v. (2025). Ocular Delivery of Viral Vectors for Retinal and Choroidal Vascular Diseases: A Review. American Journal of Ophthalmology, 279. https://doi.org/10.1016/J.AJO.2025.07.025 View PDF
Miller, Z. M., Lin, L. F., Schaffer, D. v., & Williams, E. R. (2025). Adeno-Associated Virus Serotype 9 Structural Heterogeneity and Stability Characterized by Charge Detection Mass Spectrometry. Molecular Therapy Methods & Clinical Development, 0(0), 101608. https://doi.org/10.1016/J.OMTM.2025.101608 View PDF
Hurtado, J. E., Schieferecke, A. J., Halperin, S. O., Guan, J., Aidlen, D., Schaffer, D. v., & Dueber, J. E. (2025). Nickase fidelity drives EvolvR-mediated diversification in mammalian cells. Nature Communications 2025 16:1, 16(1), 1–13. https://doi.org/10.1038/s41467-025-58414-0 View PDF
Nisanov, A. M., Rivera de Jesús, J. A., & Schaffer, D. v. (2025). Advances in AAV Capsid Engineering: Integrating Rational Design, Directed Evolution and Machine Learning. Molecular Therapy. https://doi.org/10.1016/J.YMTHE.2025.03.056 View PDF
Henshey, B., Carneiro, A., Lei, K., Schaffer, D., & Boulis, N. M. (2025). Adeno-associated viral vector targeted evolution for neurofibromatosis gene delivery. Trends in Molecular Medicine, 0(0). https://doi.org/10.1016/J.MOLMED.2025.01.004/ASSET/537FE8EF-EDD4-4873-BE4F-0119508417DB/MAIN.ASSETS/GR2.JPG. View PDF